Product
README
The top-level README describes the app, setup, common commands, bundles, config, and distribution packaging.
Open READMEDocumentation
Where to go next.
Start with v0.6.5 downloads or one-command developer setup. Workflow details, distribution, and schemas live close to the code.
Development
One-command setup
Clone the repo and run make setup on Linux/macOS, or powershell -ExecutionPolicy Bypass -File .\make.ps1 setup in Windows PowerShell 5.1. Without make on Linux/macOS, use sh scripts/dev_setup.sh.
Setup prepares missing user-level uv, Node, and Rust tools, locked dependencies, hooks, and a real Web UI smoke check. It never elevates or installs system packages; the guide lists manual desktop prerequisites. No sibling WGSExtract CLI checkout or genome download is needed for UI development: start with examples/GitHelper.
Releases
Current app and CLI: v0.6.5
Download installers and read the complete GUI and bundled CLI release notes. The changelog tracks the move to one Tauri app, native Windows setup, macOS notarization, and bundle improvements.
Open releases Open changelogWGSExtract
New workflow controls
MultiQC, expanded microarray/AADR exports, targeted Y analysis, and resource requirements. New selections are opt-in and preserve existing command defaults.
WGSExtract workflows Post-v0.6.3 feature detailsSchemas
Bundle schemas
manifest.json and page files are described by JSON Schemas in docs/schema/.
Archive
Earlier experiments
The SwiftUI app, Swift CLI, prototype renderers, and benchmark reports live on the old-experimental branch.
Distribution
Packaging
Signing, notarization, Tauri packages for each OS, release artifacts, self-updates, and embedded bundle defaults.
Open distribution docGenerate this site
Edit Markdown in site_src/, then run:
python3 scripts/validate_site_sources.py
python3 scripts/build_site.py
open site/index.htmlThe dependency-free generator writes HTML to site/ for GitHub Pages. Commit regenerated HTML alongside source changes; make site is also available.